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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CRR39_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.93
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVHLISLLT QTLALIILSL PSIINTSQLD YDTLVFKQCD PLDANILQKA TTKSPNYSNQ  60
   61 NLFLRAQALS SFLRKLESES SRSKFLKTLV GNEKHAVSGW FQCREDYPSE ICHKCVGDLR 120
  121 EISSRSCGNA TSARIHLRGC HLIYKFERID TPGAQVNNHH KYKLFETPEH GLIHKICDGA 180
  181 TAETFPGFEE MRTEALTAAE TGVVDGHGFY EDSYKLLHVV AQCDGHVEAC DCGECISSAA 240
  241 AAAAEECRWS IAGQIYLEGC HVGYTYHPHE LPNDSYHEEG SKVNTGKSLA IVVGGVAALV 300
  301 FVAIFFMFLK SLRKKGDDC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle