YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|79330452, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEKACIKRL QKEYRALCKE PVSHVVARPS PNDILEWRGF YYGKIKFPPE YPYKPPGITM  60
   61 TTPNGRFVTQ KKICLSMSDF HPESWNPMWS VSSILTGLLS FMMDNSPTTG SVNTSVAEKQ 120
  121 RLAKSSLAFN CKSVTFRKLF PEYVEKYSQQ QVAEEEAATQ QTTTSENQDF PQKDNAKVES 180
  181 EKSVGLKKES IQEVGLKERR RNKKEALPGW IVLLLVSIVG VVMALPLLQL

Type	Start	End	Confidence
Cytoplasmic	1	205	0.94
Transmembrane Helix	206	228	0.92
Non-Cytoplasmic	229	230	0.90