YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|79321216
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTISGKMGIV FRSLVVICIT FVFFQRLWMQ YWEDRLLRAN ALGLNTIQVY VPWNLHEPKP  60
   61 GKMVFEGIGD LVSFLKLCEK LDFLVMLRAG PYICGEWDLG GFPAWLLAVK PRLQLRTSDP 120
  121 VYLKLVERWW DVLLPKVFPL LYSNGGPVIM VQIENEYGSY GNDKAYLRKL VSMARGHLGD 180
  181 DIIVYTTDGG TKETLDKGTV PVADVYSAVD FSTGDDPWPI FKLQKKFNAP GRSPPLSSEF 240
  241 YTGWLTHWGE KITKTDAEFT AASLEKILSR NGSAVLYMVH GGTNFGFYNG ANTGSEESDY 300
  301 KPDLTSYDYD APIKESGDID NPKFQALQRV IKKYNASPHP ISPSNKQRKA YGSIKMQMTT 360
  361 SLFDLVRMTD PADVITSANP ISMESVGQMF GFLLYESSYI AKKSGNTLRI PKVHDRAQVF 420
  421 VSCLSQDVDV GVLRYIGTTE RWNNQPISLP TIECTTNTSL FILVENMGRV NYGPYIFDDK 480
  481 GILSSVYLDG QILHGWKMIP IPFHNLNQEP NLTFEMQHTK NRSKKFELTN DVGRKEPALF 540
  541 AGEFSINSEE EIKDTYLSFN GWGKGVAFVN EFNIGRYWPS VGPQCNLYVP APLLKRGKNT 600
  601 LVVFELESPH LELSLEAVDH QDFTCGSNVS KVNQL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle