YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|79328857
Protein type:	Globular with Signal Peptide
Type Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRCLTKKVF LIQSPILFLH LLISLSSGAV KPDLKGVCVS KGGRFPPYEL EGKPPKSVAV  60
   61 RNLATYGEAS QECLELFELL ECSICNPNVG IQPGPPRICA SFCDRVFEAC KDAYFASNAL 120
  121 KRVIGPCGVN DDIICIKASN WESNGTSFCE AAGFAVQRND DSREKPCYGS KASLESVVES 180
  181 WSRDSRKETP LKTETLSCFK DLLQWVREMT TIQKISLGMS FLIAGMFLIR QSNNRNQKQR 240
  241 LAAIQRTARR LRGNGNGDSY SAAINRRTSS D

Type	Start	End	Confidence
Signal Peptide	1	28	0.98
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	271	0.89