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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78037671, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRLIGPRRS CLAVQLSLCL IPTLAWAQQP EAAPNTRTLD SVQVTGTRIK TAELQGQVPI  60
   61 QTLNRADIER TGLTSIGEVL QELTASGSAL NAKFNSSGNF GFPPDGSGVG AGSAQVDLRH 120
  121 LGSKRVLVLV DGIRWVNESS ASGVGSSTDL NTIPLAIVER IEVLEDGASS LYGSDAIAGV 180
  181 VNIITRRTFD GAQVTLNYGQ YGKGDGANQG MDLAWGKSGE DFSLFLGASY VKQDPIYARD 240
  241 RAQARFPIPG TGLTFASSAT PDGRFQFVDP NTGVRQNLTP NAGVGTPQYD GSGGCTRSDD 300
  301 YHCFGTADRY NFAEQNLLLT PSERKGVFAQ FRYYFNDDVQ WYVKALGNRR ESTNQAAPEP 360
  361 IFLGPDAGTG NPLADNIVIS ALNPFNPFGF DLDSATNLIQ IGRRPVEGGP RRYEQQVDTQ 420
  421 YFGTGLVGTF EGAGRTWFWD VNGMYSKNKA EQTNYGSYNL YNINLALGDP AACAAVAGCV 480
  481 PLDIFSGAGS ITPEMLRWIQ PVVRDRSQNE LSLFTANLSS ELFQLPGGAV SFASGYEYRK 540
  541 YEGSYQPDPL TVAGRYNGVP SLPTAGSYDV NEAYLELNIP IFANSALGDK LDLNIAGRYS 600
  601 DYSTFGGEFT PKYGLRWQVT DEFVLRTSYA EGFRAPTIGE LFGSAARADL QLSDPCSIGL 660
  661 GGTAPRGSAA SCAALGVPAG YQQANQQISV TTGGNAQLDP ERSRSFSAGF VFSPGFASDA 720
  721 SWSDRLDLEV TFYRHHVDGA IQAINAQTQL DLCVDTLDAL YCDGIGRAST GGINAFNNRL 780
  781 TNLGSIKTDG WDVDLFWTLP QTAFGRFKLS WQNTLVGRYE ALGAAGQRQP QGPGIEVVDS 840
  841 AIPEWTSNAV LDWSLGNWTA SWTARHISKL TEQCGDAVEF AVCSDPSVGT NRLDAITYHD 900
  901 AQVGYRIDWL KGLQLTAGLN NVFDKDPPIC LSCSLNGYDA STYDIPGGRF WYARVDLKF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle