YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78049056, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARINLLPWR AERRKARERE FYSMLGFAAL GGVLLSALIW FYYDAQISGQ TERNAFLTTE  60
   61 IDKVKAQNEE IKELDKKKDR LLARKKVIEE LQANRSQMVH LFDSLVRTIP DGVALTNIKQ 120
  121 DGDILTLEGR SQSNARVSAY MRNLESSGWM TNPDLSIIEA KSQDKAGQPA ASSMDTKTLP 180
  181 YVFTLKVKLA NPNEADKNGT APGAADPAAP GTAAPGAAPA GATPAAPAAA PAPATPPAAA 240
  241 PAPTQAAPAP ANRPQEGAAS

Type	Start	End	Confidence
Cytoplasmic	1	20	0.99
Transmembrane Helix	21	43	0.97
Non-Cytoplasmic	44	260	0.99