YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78036586, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGRRTTLTR QRIATWCSSA LLGLALWSGA LVPVWARGAG HAPAGPPVPL LWKVDGKGGT  60
   61 LYLLGSFHVL KPSDYPLSPD VMQAFAKADR LLFELPPDDA QSPELASRML QAARRTDGRT 120
  121 LQDTLDAKTW QALSAYARKY GMSLASLQPL EPWFVALTIS LAEMTRQGMD PNAGLDHYLM 180
  181 EQAQARGKPA DGLERAAEQI ALLDGMSPTE QHQLLEESLD EADATDQLRQ LHAAWRNGDV 240
  241 HTLSTQMAED MRRQYPALYQ DINVERNARW VPRLEQRLGK GGGTTLVVVG ALHLLGNDGV 300
  301 VERLRARGYH VERICSACTT QAGH

Type	Start	End	Confidence
Signal Peptide	1	36	0.99
N-region	1	27
H-region	28	33
C-region	34	36
Cleavage Site	36	37
Non-Cytoplasmic	37	324	0.99