YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78046869, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEWMLLPLKR YADFNGRSRR KEYWMFALMQ LLVLFVFGGL FAVAAVAMGN ENGPGALAWL  60
   61 ICAVMVIVCL ALIVPGIAVT VRRLHDQDKS GWFYLISLVP YVGAFVLLVF MCIEGTPGPN 120
  121 QYGENPKQ

Type	Start	End	Confidence
Cytoplasmic	1	25	0.94
Transmembrane Helix	26	48	0.93
Non-Cytoplasmic	49	55	0.91
Transmembrane Helix	56	79	0.94
Cytoplasmic	80	90	0.90
Transmembrane Helix	91	113	0.93
Non-Cytoplasmic	114	128	0.96