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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73661008, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MINIDLFYNI ALLIFVVVII DLIMRHSGHF TRNSKIILGA VIGAATVLGM MNAVSVAPGV  60
   61 FFDGRSVLIS AGAFIGGPVI ALISSVIAII YRISLGGDGV LVGSSVIVWA AMAGLAYYYL 120
  121 RQRYPKVTNP LLLLSFSLIV HAGMLSLMLA LPGGLSSTVI SDIALPVLTI FPLAGLVVCL 180
  181 LFIDQESYYS TISELSLSER KLTTALDTIR EGNEKLRLHT QNSPLATIEW NADFVITRWE 240
  241 GAALNIFGWN SDETIGKSIY DLNIIYEPDA PIVEQTIKTL KEGISSQVVF LNRNYTKDRR 300
  301 VIYCTWYNSA LYASNGKLIS TMSQVEDSTE REQIKISLAE NEKHYRELYE QSPAGYQSLD 360
  361 QNGIFVEVNQ IWLDILGYQK EEVIGHWFGE FVAPEDLDKF KKNFPLFVKA GSTHVDFKMK 420
  421 RKDGQISIVT FEGRIAYTPK GEFKQTHCII QDITERYMAE EATREHKERY QALFNSNNDA 480
  481 ILVHQPKGEL TPGTFMEAND AASTLLGYSR EELLKLSPFD ITKRDENGEH PVIKAIESLR 540
  541 RTGKVQAERI FIHKDHHEIP VEINARLFKY KGTDTIITIA HDITTRKQAE AALTHSAEEW 600
  601 RTTFDSIKDM IAIVDPKHIV IRVNLAFASA LGLKPNDLVG KYCYQVVHGM NQPHPMCPHA 660
  661 RTLESRHVES SEYYDKRLKL WVEASSSPIF NKKGELTGSV HIIKDISKRK EEELQQQQLR 720
  721 NKAEMSSRLA AVGEMAAGIA HEINNPLTGV IGFSELLLER EDLPDDIKAN LKIINDGSQR 780
  781 AKEIIKRMLT FARQTTPQMS RVNITELINH TLELRNYVLA TANIKIVKDY DATLPWVVAD 840
  841 PGQLQQVFLN LIVNAEYAMK KAHDKGILTI KTEKLDGYVR ISVKDDGPGM PEGIRKKLFQ 900
  901 PFFTTKEPGE GTGLGLSLSL GIIQEHTGTI RAESEEGKGT TFIIELPIAS DTDKIAEITP 960
  961 EAEPPRSVVK AKVLVVDDEP SIRLLIKTIL TQNGHVVEEC DDPRKALEKL MATAYDVILL1020
 1021 DIRMPGMSGI ELYRNILTKR PDMALSVIFI TGDTSDEATR EYLSAHQTPY ISKPFNRKTL1080
 1081 ETKVDEILGR KA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle