YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|79328311
Protein type:	Globular with Signal Peptide
Type Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKIPVLLMG CGGVGRHLLQ HIVSCRSLHA KMGVHIRVIG VCDSKSLVAP MDVLKEELND  60
   61 ELLSEVCLIK STGSALSKLG ALEKGGYRVV HDSELSTETE EIAKLLGKST GLAVVDCSAS 120
  121 METIEILMKA VDLGCCIVLA NKKPVTSTLE HYDKLALHPR FIRHESTVGA GLPVIASLNR 180
  181 IISSGDPVHR IVGSLSGTLG YVMSELEDGK PLSQVVQAAK KLGYTEPDPR DDLGGMDVAR 240
  241 KGLILARLLG KRIIMDSIKI ESLYPEEMGP GLMSVDDFLH NGIVKLDQNI EERVKKASSK 300
  301 GCVLRYVCVI EGSSVQVGIR EVSKDSPLGR LRGSDNIVKI YSRCYKEQPL VIQGAGAGND 360
  361 TTAAGVLADI IDLQDLFH

Type	Start	End	Confidence
Signal Peptide	1	16	0.66
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	378	0.99