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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|79479049, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYVVVSGGV VSGLGKGVTA SSIGLILKSC GFRVTAIKID PYLNIDAGTM SPIEHGEVYV  60
   61 LDDGGEVDLD LGNYERFMDI KLTSENNITT GKVYKHVLEK ERRGDYLGKT VQVVPHITDA 120
  121 IQKWIERAAR IPVDGQSGPA DVCVIELGGT IGDIESMPFI EALGQFSYRV GTDNFCLIHV 180
  181 SLVPVLNVVG EQKTKPTQHS VRDLRGLGLS PNILACRSTK PLEDNVKAKL SQFCHVPMEN 240
  241 VVTLYDCPNI WHIPLLLKEQ KAHEAIFRVL NLEGVAKEPA LEEWSLMAKM TDKLHVPVRI 300
  301 AVVGKYTELL DSYLSIHKAL LHASVARRKK LIIDWISASD LEQGAKKENP DAYKAAWKLL 360
  361 KGADGVLVPG GFGSRGVEGK MLAAKYAREN RIPYLGICLG MQLAVIEYAR TILGLADANS 420
  421 TELDPNTKNP CVIFMPEGSK THMGGTMRLG SRRTYFHSKD SKSARLYGNK SFVDERHRHR 480
  481 YEVNPAMVPR FESSGLTFTG KDETGQRMEI IELPNHPFYV GAQFHPEYKS RPGKPSPLFL 540
  541 GLIGAASGEL DTVLLQSYQE TVVPRSLPNG KLERVYWKGA AKKPVSVVYS LCDRVYS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle