YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|79436765
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQQSFTFQLL PVDFFSPKIT DSSSSNFLRS KNHYPSMESI NTLKGYDKVS DQENQIHHHH  60
   61 HSPLPKPSSF SRKTLIATGS VVSLLLILSV VALTAGAFTH SPPHHPPISS ASLKSLCSVT 120
  121 RYPETCFNSL SSSLNESDSK LNPESILELS LRVAAKEISN LSISFRSIND MPEDAAVGDC 180
  181 VKLYTDALSQ LNDSITEIER KKKKGGNNWL TEEVVGDVKT WISAAMTDGE TCSDGIEEMG 240
  241 TIVGNEIKKK MEMANQMMSI SLAIVSQMKK LLLIFH

Type	Start	End	Confidence
Cytoplasmic	1	74	0.97
Transmembrane Helix	75	98	0.91
Non-Cytoplasmic	99	276	0.98