YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|79328754, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESMVCGRHL ISYHTSLLCL LNIYLKTCPL ESPRSSIKVS QSLKKTLSDS LHYHGRLQWL  60
   61 RQRGTMISAP RSGDYRCFLN HVSSYPLLTV FSLVQFAMVH SAIFVKLRFM FCLYVLDRLQ 120
  121 NVCGFLNLHG SFHVREDPPI LLQLITYLLQ TLCVASSYTL SHEFALLKIF GISSLTHPCD 180
  181 INIFVQTSAK ALRCVVLLVQ TRRLPLAPSS TPFRLLTLAI RSSNDLFLEE ASTTFDLTCS 240
  241 TKLLTFWFKA LKDHLPSTSC YLVIFLVLTL GYALYYCAFN FGISDFSYLY ICYLF

Type	Start	End	Confidence
Cytoplasmic	1	84	0.67
Transmembrane Helix	85	104	0.73
Non-Cytoplasmic	105	139	0.58
Transmembrane Helix	140	160	0.57
Cytoplasmic	161	257	0.91
Transmembrane Helix	258	279	0.89
Non-Cytoplasmic	280	295	0.89