YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|79317769
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERTTVILFV FFLLSVAMCS LHSFSSVAIS FRTQKYVNTS LVHRLSPIGY RNYPLPWAVT  60
   61 SIDEIPPNAV RRKIDRNWRG GFSLGVDLGL SRTGIAISKG YTVKPLTVLK SRGQKLETRL 120
  121 LEIAEEEEAD EFIIGLPRSS DGKETIQSNK IRSVAGRLAI QAAERGWRVY VFDEHGTTSE 180
  181 ASDRMIVMGL SKSERQNRSD AYAAVILLER YFSTQGLGIE IILPKSLELQ AKIKNGAPVD 240
  241 PDFNPENLEE YYTF

Type	Start	End	Confidence
Signal Peptide	1	25	0.90
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	254	0.99