YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76594133
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTWANLGLQ DSASPLMEQL IFFHDHALLI LVMITVLVGY LMLTLFFNKY INRFLLHGQL  60
   61 IEVIWTILPA IILLFIAFPS LRLLYLIDEI NEPSVTLKSI GHQWYWSYEY SDFNNIELDS 120
  121 YMIPTNELNK DEFRLLDVDN RIILPMNSQI RILVTAADVI HSWTIPALGV KVDGTPGRLN 180
  181 QTNFFINRPG LFYGQCSEIC GANHSFMPIV IESVPVNYFI KWISNNIN

Type	Start	End	Confidence
Non-Cytoplasmic	1	20	0.60
Transmembrane Helix	21	47	0.82
Cytoplasmic	48	57	0.51
Transmembrane Helix	58	81	0.81
Non-Cytoplasmic	82	228	0.60