YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|113673322, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLSELYGFW IMLFLSLWES SLGQIVFSVS EEVNKGTVIG NIAKDLRMSA QELESRMFQI  60
   61 MPGSNAKYFD VNVKTGSLFV KDRIDREELC GVNQKCALNL EALAQNPHRL YRLEIVIIDV 120
  121 NDNAPVFPNS TYILSVTENA NEGDRFPLPI AKDIDVGSNS LKDYKLSSNE HFSLDVHRGQ 180
  181 QSSLAELVLQ KTLDRENKQV YVFCLCVVII YQLMQCLGGT KLLTLTVQIC WTFLYTCSSV 240
  241

Type	Start	End	Confidence
Signal Peptide	1	23	0.63
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	240	0.88