YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FPRS6_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEANFSIPQN GSEVVFYDST TSRVICIFLV VVLSITFLLG VIGNGLVIYV AGFRMTHTVT  60
   61 TICYLNLALS DFSYMASLPF QITSIVMNGE WLFGWFLCKF VHMIINVNLF LSIFLITFIA 120
  121 MDRCICVLHP VWAQNHRTVN VATKVIFGAW ILVLMLIFPH CIFVTTVKDE SGKVHCICNF 180
  181 ESWAATPEEQ VKVSMTVSLI SVTISFIIGF SIPMIFIVIC YGLMAAKIGR RGFVNSSRPL 240
  241 RVLTAVAISF FVCWFPFQLI FLLGNIGNKE TQNNIDTWVN TASTLASFNS CLNPILYVFL 300
  301 GQQFRERLIY SLSASLERAL REDSALNSDK TRNLSSQRL

Type	Start	End	Confidence
Non-Cytoplasmic	1	23	0.64
Transmembrane Helix	24	50	0.85
Cytoplasmic	51	61	0.48
Transmembrane Helix	62	82	0.65
Non-Cytoplasmic	83	99	0.74
Transmembrane Helix	100	121	0.87
Cytoplasmic	122	140	0.82
Transmembrane Helix	141	162	0.90
Non-Cytoplasmic	163	201	0.92
Transmembrane Helix	202	225	0.89
Cytoplasmic	226	241	0.88
Transmembrane Helix	242	262	0.93
Non-Cytoplasmic	263	280	0.86
Transmembrane Helix	281	301	0.82
Cytoplasmic	302	339	0.87