YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|148726298, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASEQEISNA PMKKSMREKA IERRSANKEH NSNFKAGYVP IEEERLHKTG LRGRKGIFAI  60
   61 GIIILLFLLA LINLIITLVI WTVIRIGPGG CESMEFHESG LLRFKQKADM GIVHPLHKST 120
  121 VGGRKDQDLV ITGNNNPVVF RQGNTKLSVE EDKTSIVSDL GISFTDPRTQ NTFFSTDFDT 180
  181 HEFHLPKEVK VLNVKKASTE RITSNASSDL TIKGDGKAII RGNEGVYIMG KTVEFSMGGG 240
  241 IELKAENSII LNGSVMISPS RIPNSSLGGD LYFNDGLERY KLCMCADGTL FRVQVKYSNM 300
  301 GCQTSDNPCG AAH

Type	Start	End	Confidence
Cytoplasmic	1	56	0.96
Transmembrane Helix	57	81	0.90
Non-Cytoplasmic	82	313	0.97