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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78771773
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFDCWGYAEY QVNWLQPSAS KGSFLSELKP FSKRASQLIV DVPVAHLRKI KNTEGVSSIT  60
   61 RESEHFSNTT TLHGPKRIYN GKGWSCVFWV FIWISSMIML LTQVTSLISM YISKPTVSQV 120
  121 SFLLSEGGMQ FPRVTVCSFN PIKRTTVEAL NSTKDLSDDL LDYLMMFNSD AMTLYGRADA 180
  181 ASLHSGDNVF KHYVSSHPNF TADNFFMDAG FSCGDMFKMC SFGGRRFDCC KYATPIFSDL 240
  241 GKCFTLNLQG SDKSWMKMQT EPGIAAGLQI ILDSHLEEQF DSETDGVTPV FSSAFENGFR 300
  301 FYIHSSEEIP FLASEGIAVS PDSVVYSALS SSKYILLSSN AWGNCSDSWP RGYDYSFPYT 360
  361 SAMCSTMCKA QYFQNLCGCS PSIYNHLNRF NDCTPYETFI CMDTKMKKVV NQSFNIEMPT 420
  421 CEECKVECKS QVYHSFNSYG KGLSRGALMW LTKQGKQETW TIPHMKLNFQ VVNVFFRDMS 480
  481 YTEYIQKRGM SLTELLSDIG GNMGMFMGMS VFTIIELFLF LSKIGWIGFS RKRRDYMYSK 540
  541 KKNEEMHEKE LEDVVTGFKL FRHRKSGKDM SHLREKIKGL SMHRVTSEQL NVCKLAWENE 600
  601 PDIERRLASV TRQNSALKEH KDYKQPTILP FDLKDIKDQI TRGRAASMFR SRRSRSETAP 660
  661 AVIHEA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle