YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|60287223
Protein type:	Transmembrane
Type Confidence:	0.78
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNIPARHGAN HHELFVGIGR SAADESNSNI ATVFHRQSRV EMCNSVRTAL AASNCCSIVL  60
   61 CCVLLLTLTL TVAVTAQHNQ ADETCETLPS EIHLIKEEYD ELGRLYRTCN GDVTVNKCEG 120
  121 KCNSQVQPSV ITATGFLKEC YCCRESFLRE RQLQLTHCYD PDGVRMTDHE SATMEIRLKE 180
  181 PVDCKCFKCG EMVR

Type	Start	End	Confidence
Cytoplasmic	1	48	0.72
Transmembrane Helix	49	70	0.69
Non-Cytoplasmic	71	194	0.95