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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|77154528
Protein type: Transmembrane
Type Confidence: 0.70
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKMPLQLSS QDGIWPARSA RRLHHHHQLA YHHHKQQQQQ QAKQKQKQNG VQQGRSPTFM  60
   61 PVMLLLLMAT LLTRPLSAFS NRLSDTKLHE IYLDDKEIKL SWMVDWYKQE VLFHLQNAFN 120
  121 EQHRWFYLGF SKRGGLADAD ICFFENQNGF FNAVTDTYTS PDGQWVRRDY QQDCEVFKMD 180
  181 EFTLAFRRKF DTCDPLDLRL HEGTMYVVWA RGETELALED HQFALPNVTA PHEAGVKMLQ 240
  241 LLRADKILIP ESELDHMEIT LQEAPIPSQE TTYWCHVQRL EGNLRRRHHI VQFEPLIRTP 300
  301 GIVHHMEVFH CEAGEHEEIP LYNGDCEQLP PRAKICSKVM VLWAMGAGTF TYPPEAGLPI 360
  361 GGPGFNPYVR LEVHFNNPEK QSGLVDNSGF RIKMSKTLRQ YDAAVMELGL EYTDKMAIPP 420
  421 GQTAFPLSGY CVADCTRAAL PATGIIIFGS QLHTHLRGVR VLTRHFRGEQ ELREVNRDDY 480
  481 YSNHFQEMRT LHYKPRVLPG DALVTTCYYN TKDDKTAALG GFSISDEMCV NYIHYYPATK 540
  541 LEVCKSSVSE ETLENYFIYM KRTEHQHGVH LNGARSSNYR SIEWTQPRID QLYTMYMQEP 600
  601 LSMQCNRSDG TRFEGRSSWE GVAATPVQIR IPIHRKLCPN YNPLWLKPLE KGDCDLLGEC 660
  661 IY

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