YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76782202
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAKLLGAAS SAVTAPPHAS RFSRPISRFV LQTRLNFSFR FQGSSLAKRG FQSVQAAATS  60
   61 IGSLSIKKRV DVSENLTLDG IRISLIRQED SIIFSLLERA QYCYNADTYN PNAFSMDGFH 120
  121 GSLVEYMVKE TEKLHAQVGR YKSPDEHPFF PDDLPDPLLP PLQYPQVLHP FADSININKK 180
  181 VWDMYFRDLI PRLVEEGDDG NCGSTAVCDT MCLQALSKRM HYGKFVAEAK FRASPDAYEA 240
  241 AIRAQDRKKL MDMLTYSEVE EAIRKRVEMK AKTYAQEVTV NVEEDEAEPV YKIEPSLVAD 300
  301 LYGDWIMPLT KEVQVEYLLR RLD

Type	Start	End	Confidence
Signal Peptide	1	19	0.97
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	323	0.99