YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78395043, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALLVRVLRK QTSISQWVPI CSQLMSVSST QSQRSKTLSS TSQWLQKNPS GMCVGSEQIV  60
   61 GMDTPHSRKY HNTSKLSTAR DSPQPVEEKV GPFTKIIEAM GFTGPLKYSK WKIKIAALRM 120
  121 YTSCVEKTDF EEFFLRCQMP DTFNSWFLIT LLHVWMCLVR MKQEGRTGKY MCRIIVHFMW 180
  181 EDVEQRGRVM GVNSYILKKN MALMTNNFYA AVLGYDEGIL SDDHGLAAAL WRTFFNQKCE 240
  241 DPRQLELLVE YVRKQMQYLD SMNGEDLLLT GEVRWRPLVE KNPQSILKPH APTYNDEGL

Type	Start	End	Confidence
Signal Peptide	1	32	0.75
N-region	1	23
H-region	24	29
C-region	30	32
Cleavage Site	32	33
Non-Cytoplasmic	33	299	0.92