YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YCIB_THICR
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLLFDLFPV ILFFIAFKLY GIYVATAVAI IASIAQVAYV YAKNKRIEKM HIITLALIVI  60
   61 LGGATLILQD ETFIKWKPTV VNWGFALVFL GSHFIGQKPI IRRMMDQAIS LPDTAWIKLS 120
  121 YMWIAFFIFS GIANIYVAYQ YDTDTWVNFK LFGLMGLTLA FILIQGVYIS RFIKSSDLDK 180
  181 NDETEEKVMD STIETLAEVE LDSVVDSKHD SKKS

Type	Start	End	Confidence
Non-Cytoplasmic	1	18	0.89
Transmembrane Helix	19	40	0.92
Cytoplasmic	41	49	0.87
Transmembrane Helix	50	68	0.95
Non-Cytoplasmic	69	78	0.77
Transmembrane Helix	79	97	0.92
Cytoplasmic	98	118	0.84
Transmembrane Helix	119	139	0.93
Non-Cytoplasmic	140	148	0.82
Transmembrane Helix	149	169	0.92
Cytoplasmic	170	214	0.98