YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78363364, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFELILVII TAITGVVVYV DRTVWRPKRE RSVTTEKEPL LVEYSRSLFP VFLIVLVLRS  60
   61 FVIEPFRIPS GSMYPTLEIG DFIVVNKFAY GIKLPVTQTK ILPIGEPKRG DVVVFKYPKD 120
  121 PDVDYIKRVV GLPGDEITYI GRTVFINGKP AKQTFLGEYQ GEGSGKVMNG ASLMQENLGD 180
  181 ASHLILSDKE KTSQDMNTVV VPEGYYFMMG DNRDHSNDSR FWGFVPEKNL KGKAFGIWMN 240
  241 WDDGIQFDRI GKGIE

Type	Start	End	Confidence
Non-Cytoplasmic	1	4	0.92
Transmembrane Helix	5	25	0.85
Cytoplasmic	26	43	0.87
Transmembrane Helix	44	63	0.82
Non-Cytoplasmic	64	255	0.91