YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78362694, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELLIAIVIG VLTASGVFLT LRARTFPVVL GLTLLAYAVN VFLFAMGRLT IGLPAVINPA  60
   61 QGGYTDPLPQ ALVLTAIVIA FGMTAFLIVL ALKSRSELGN DHVDGLHLAS DEVAYDKKST 120
  121 AQKTQQPNKE ASHE

Type	Start	End	Confidence
Non-Cytoplasmic	1	3	0.76
Transmembrane Helix	4	23	0.74
Cytoplasmic	24	28	0.71
Transmembrane Helix	29	51	0.85
Non-Cytoplasmic	52	70	0.82
Transmembrane Helix	71	92	0.93
Cytoplasmic	93	134	0.97