YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78218257, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRFVSSVWT YRVVRLALAV LFLVAGAMKL ADMQAFARVI EEYRMLPQAV VPWVAFLLPL  60
   61 AEVAAGVLLF FDRRGGLTAV TAMLLLFLGV LGYAMAAGLT IGDCGCFEPG DLPEGVEDGS 120
  121 ALRDAFVRDV VMLAGACHLY WWRMRVAGRV FL

Type	Start	End	Confidence
Cytoplasmic	1	10	0.87
Transmembrane Helix	11	31	0.87
Non-Cytoplasmic	32	48	0.92
Transmembrane Helix	49	71	0.92
Cytoplasmic	72	78	0.84
Transmembrane Helix	79	101	0.88
Non-Cytoplasmic	102	124	0.91
Transmembrane Helix	125	142	0.91
Cytoplasmic	143	152	0.86