YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|68537023, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVKYDDREA IAHGKLRTSS LREKPGFPSW AMKLTMAITG IIFALFVLVH MVGNLKVYMG  60
   61 AESFNTYADF LREFGYPLLP HESFLWVARI VLLVSLILHV WCAFALTSRA HQSRGRYRRK 120
  121 GMISSWNTFT ARSMIVTGVV LLLFIIFHIL DLTMGVKPVA SEDFQGPTDG AHAAYQNLIA 180
  181 SFDRPAVAIF YILAMLILFM HLSHGIWTAT SDLGITGHRT RKVMLWIAYL LPAIVMIGNI 240
  241 SIPLAVMFGL VDQVPFVPAG Q

Type	Start	End	Confidence
Cytoplasmic	1	29	0.98
Transmembrane Helix	30	52	0.89
Non-Cytoplasmic	53	84	0.96
Transmembrane Helix	85	107	0.95
Cytoplasmic	108	127	0.93
Transmembrane Helix	128	150	0.93
Non-Cytoplasmic	151	186	0.96
Transmembrane Helix	187	207	0.93
Cytoplasmic	208	224	0.90
Transmembrane Helix	225	248	0.92
Non-Cytoplasmic	249	261	0.92