YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74095596
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTTFSVRFM QRLAVTTALS VAALSTAAHA DDLNIKTMIP GVPQIDAEAY ILIDYNSGKV  60
   61 LAEQNADARR DPASLTKMMT SYVIGQAMKA GKFKESDLVT IGNDAWATGN PVFKGSSLMF 120
  121 LKPGMQVPVS QLIRGINLQS GNDACVAMAD YVAGSQDAFV GLMNSYVTAL GLKNTHFQTV 180
  181 HGLDADGQYS SARDMALIGQ ALIRDVPNEY SIYKEKEFTF NGIRQTNRNG LLWDNSLNVD 240
  241 GIKTGHTDKA GYNLVASATE GQMRLISAVM GGRTFKGREA ESKKLLTWGF RFFETVNPLK 300
  301 AGKEFASEPA WFGDNDRASL GVDKDIYLTI PRGRMKDLKA SYVLNTSELH APLAKNQVVG 360
  361 TINFQLDGKT IEQRPLVVLE EIQEGNFFGR IIDYIKLMFH HWFG

Type	Start	End	Confidence
Signal Peptide	1	30	0.99
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	404	0.99