YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78171348, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVLVTGAAG FIGSTLCKRL LERGDRVTGI DNLNDYYDVS LKEARLAQLQ PYENFTFVKG  60
   61 DLADRAGMEA LFAKGEFEGV VNLAAQAGVR YSIENPHSYV ESNIVGFLHI LEGCRHHGVK 120
  121 HLVYASSSSV YGANETMPFS VHDNVDHPLS LYAASKKANE LMAHTYSHLY NIPTTGLRFF 180
  181 TVYGPWGRPD MALFLFTDAI LKNKPIKVFN YGKHRRDFTY IDDIVEGVIR TLDHTATPNP 240
  241 AWSGATPDPG SSKAPWRVYN IGNSQPVELM DYIQALENEL GRTAIKEFLP LQPGDVPDTY 300
  301 ADVDQLIEDV HYKPQTSVPE GVKRFVAWYK EYYGVKG

Type	Start	End	Confidence
Signal Peptide	1	17	0.64
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	337	0.99