YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78167499, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYPPAGHPP HDFTDTMNFL TTKRLVTTAL ILLVILNVTL LSVLWWQNIH APAPRPVTLT  60
   61 REVSRQIYFQ LPLSLTRSQA ASFQELRRQH FRKVRPQIQA IGSLKQQLVE ESFQESPDTM 120
  121 KITALATELG NRQAEIEREL AHHFHELAMT CTPAQRDSLK TMLGELATRK IIMHQEHWKS 180
  181 TPAGGTR

Type	Start	End	Confidence
Cytoplasmic	1	24	0.69
Transmembrane Helix	25	46	0.91
Non-Cytoplasmic	47	187	0.70