YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78166584, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRPRASMPG LSGMRVAAGA LMNLKKLKKH ITMNATSRLF AAAAFSVLAA CSEGGQTPRS  60
   61 SSLRSEPVAP VAAARVDDPE LVELGRKLYF DPRLSKSGFI SCNSCHNLSM GGSDNLKSSI 120
  121 GHNWSKGPIN APTVLNSSMN LAQFWDGRAK DLQEQAGGPI ANPGEMAFTH KLAVDMLLSI 180
  181 PAYVDEFREV FGAEGIDIKK VTKAIAAFEE TLVTPGSRFD FWLKGDDRAL SAEELEGYQL 240
  241 FKSSGCTACH NGPLFGGNSY QKMGVIEPYS AKSPAEGRSA VTGRDADRFN FKVPTLRNVE 300
  301 LTYPYFHDGE AETLTEAVEV MGRIQLGRTY SESDNRKIVA FLKTLTGKQP EIMLPLLPPS 360
  361 SDSTPRPTPF E

Type	Start	End	Confidence
Signal Peptide	1	54	0.90
N-region	1	45
H-region	46	51
C-region	52	54
Cleavage Site	54	55
Non-Cytoplasmic	55	371	0.99