YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77997225, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.73
Topology Confidence:	0.29
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMLDKTCNE FLEALASKAP VPGGGGAAAL GGAIGMALSN MVGNLTVGKK KYADVEDEVK  60
   61 ELIARGSQII EELKSLVDKD AEVFEPLSKA YGLPAETEEQ KKIKEETLEK CSKDACSVPM 120
  121 EIMRKAFEGI KIHQRMGQIG SKLAISDVGC GVVFLKSALI SGMLNVLINL NTIKDQEFVE 180
  181 KTKAEMEQLL NEGSKIADET LELVINQIKK

Type	Start	End	Confidence
Non-Cytoplasmic	1	20	0.72
Transmembrane Helix	21	43	0.57
Cytoplasmic	44	142	0.52
Transmembrane Helix	143	160	0.29
Non-Cytoplasmic	161	210	0.65