YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78045067, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVLIIFLFG LIIGSFLNVV IYRLPRGQSI LYPPSTCPNC GQRLKPWHLI PVLSFLLQKG  60
   61 RCAYCGGKIS FKYPLVELIT AFIFSVVHLK FGLSLLTLKY LLFFIFLIPL FFLDLENFLL 120
  121 PDKLTYPLFL AGVLINLITR ELSWKSLIFG VITGFGLLFL LALISRGGMG GGDIKLAAGL 180
  181 GAFLGFPLIL ETLFLAFFFG GLTGIILLLT KKKARGDMVP FGPFLIGAAF ITVLWGEKII 240
  241 KWYLKIFFL

Type	Start	End	Confidence
Non-Cytoplasmic	1	4	0.70
Transmembrane Helix	5	24	0.91
Cytoplasmic	25	90	0.73
Transmembrane Helix	91	113	0.79
Non-Cytoplasmic	114	122	0.59
Transmembrane Helix	123	139	0.78
Cytoplasmic	140	146	0.77
Transmembrane Helix	147	167	0.92
Non-Cytoplasmic	168	185	0.76
Transmembrane Helix	186	209	0.89
Cytoplasmic	210	217	0.86
Transmembrane Helix	218	239	0.87
Non-Cytoplasmic	240	249	0.88