YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77997141, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRSLKESFS YAFWGLIYSL RTQRNMKIHF LAGIGVLTLS LFLPFNGYDY LFVFFAVALV  60
   61 IITEMINTAI EATVDLFTKD YHRLAKIAKD VAAGAVLLAA INSIGVFFLV IIPKIKGFSY 120
  121 LNFYRIRLYP LHILLLLIGL LFLLYTFISY GRSRGGKGHF

Type	Start	End	Confidence
Cytoplasmic	1	25	0.97
Transmembrane Helix	26	45	0.91
Non-Cytoplasmic	46	50	0.80
Transmembrane Helix	51	70	0.92
Cytoplasmic	71	90	0.83
Transmembrane Helix	91	112	0.95
Non-Cytoplasmic	113	127	0.91
Transmembrane Helix	128	149	0.91
Cytoplasmic	150	160	0.89