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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|77997126, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFQSLLASI KERFQNLSSF QKRAYGILIL TAVLSLLLGY IFLGRPSYTP LATGLDAKEA  60
   61 GAIAEKLKEW KINYKLGDEG TTILVPKSQV YEARIKLASA GVLETNSGIG FELFDQTKLG 120
  121 ASDFENQVNY QRALQEELRR TIVQLDAVED ARVHLVLPEK SVFISEEKPA TASILLKLKP 180
  181 LKKLTPQEIK GIIYLVANSV EGLKPENVQV VDTYGNVLSD QVDLSSSLSA QSGRQQEMKK 240
  241 QFETELTNRI NNLLTTILGP GKAVVSINAD LDFNQEETTS QIALPGPLVS EQGSKEVVYG 300
  301 SPGASGTVGT GPNTNQNYPY INGSTNGEVQ VKEDFTRNYQ VGQTVYKLVK APGTVKRLSA 360
  361 AIAIDSGVPA ADVNKIRDIV AAAMGYDQNR GDQIIINTIT FDKTLAKQME EQQAQAQKEQ 420
  421 QARQALYKWL AIGAGALVFL SIIVFFGIRR FRKKPAAVAD ISPRAPVGVS ELEAAAAAER 480
  481 GPGIIVREMT AEPIVIQKVQ SDIEKIKSLV DKNPDEVAMV LRAWLTDE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle