YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78044921, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNPFDDRSKL SLYGIIFLLL ALVCYLWWTG PESPPLKETA EQEVITREVT PKGTVVVHVA  60
   61 GAVYKPGVYV LEEGARVKDA IEKARGMLPL ADDSSINLAA KVSDGQKIYI PFKNETTTAS 120
  121 ASTNKAFGQQ NALKGSGGQE AKVNINTATA EELDELPGVG PATAAKIIEY REQNGPFATI 180
  181 EDLKKVKGIG DKKFETLKDY ITVN

Type	Start	End	Confidence
Cytoplasmic	1	9	0.91
Transmembrane Helix	10	29	0.95
Non-Cytoplasmic	30	204	0.95