YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78044888, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSETEKETT KSFSWKNEIK EFISAAIWAV ILAFIIKTFI FQLTYVPTGS MIPTILPNDR  60
   61 VVVLKFWYKI KPIERGQIVV FDPPNSANSP PFIKRVIGLP GETLEIKNNT VYINGKPLKE 120
  121 NYLPAKMEME PFGPFKIPKD AIFVMGDNRQ HSADSRYFGA VPIKNIKGRA VLTYWPLNRV 180
  181 KVLR

Type	Start	End	Confidence
Cytoplasmic	1	20	0.85
Transmembrane Helix	21	41	0.90
Non-Cytoplasmic	42	184	0.81