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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78044857, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVIAMETVNL KVYGMSCAAC VKKVEKGISG VPGVEQVVVN LINNQVAVKY DPQKTGISDF  60
   61 ARVIEDLGYE MGVAEYKFRV EGMSCAACVQ KVEKAARGFA GVLDAVVNLP AQQLTVKAYE 120
  121 GVLDVGRLKR EIRELGYEIF NFEEIDPLAR EKEAREKEIR HQRLKMIVVW PLAILAMIGT 180
  181 MRHLWIFKYF VPEFLGNNYF LMAITTPVVL YGGYEFFVKS YQGLKRGVTD MNLLYATGIG 240
  241 SAYLIAVINT LFPNAGFGGP KATFFESAAL LTAFIILGRY LEALTRGRTS EALRKLISLK 300
  301 PKTARVLING EEKEIPADEV EIGDLVVVRP GETIPVDGVV ERGTASVDES MLTGESLPVD 360
  361 KGEGSMVLGG SIIKTGALTV KATRVGKETS LSRIIKLMEE AQTTKAPLQK LADVVAGNFI 420
  421 LGVHILALVT FFFWFFYGYQ AYFTPETRFL MSPAKIAEMG VFGFSMLISL TVLVISCPCA 480
  481 VGLAMPSAIM AGTGKGAEYG VLFKNAEVIE KMTKVKVIAF DKTGTITKGE PEVTDLIPFE 540
  541 INEQQLLELA GVAEKLSEHP LAQAIIKKYR EINQKEPSEP ATFHNIPGKG IMATYSGVNI 600
  601 LAGSEKFLQE NRVDTSLAGE IAKKLKGEGK TLVYFAADHR LVGVIALADT VKESSAKAIE 660
  661 LLKKKGYIPV MLTGDNEVTA RAIAQKVGIS EVVAGVLPEG KVEAIKAYQE KGYMVAMAGD 720
  721 GINDAPALTQ ADVGIAMGTG TDIAKEAGEV VIVKGDLVDI VNAMDIARAT FGKVKQNFFW 780
  781 AFVYNTLGIP FAAGVFYPWT KALVSPELAA LLMAFSSVSV TLNTLLLKRF KPSGKAVG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle