YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77996890, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMNLKKSLA TLTLSVFLLQ SSAWATTITV KSGDNLWLLA RRYNTTVEAI KKANNLKSEA  60
   61 LKPGQKLVIP GKSTATAVSR SSSGSSVYIV KAGDTLWDIA KKFNLTVDEL KRLNNLKSEK 120
  121 LSIGQKLLVK KTTSRNSPRP KARTTKKVSR GEGRGDVVKI ALSYLGTPYQ WGASSGSAFD 180
  181 CSGFTAFVYR QVGINLPHNS LAQYEVGKKI DKSELSPGDL VFFKTQGSSV INHVGIYIGD 240
  241 GQFIHASSGK DRVIISSLRE GYYASCYAGA VRVR

Type	Start	End	Confidence
Signal Peptide	1	25	0.99
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	274	0.99