YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78044767, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.69
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIIFKVYRIT RQKVLAVMVG IIILTVLGSV FRNILLNKEV RVLAVAVANR IIVIDPGHGG  60
   61 QDPGCKGQQG AVEKDITLDI ARRVAAKLQM AGAQVYLTRS GDYDLADPGI RGYSIRKKQD 120
  121 LARRIQFAEE KHAEVLISIH VNSFPERKYR GAQTFYQEGD SGGKRLAEHI QDSFKTILAN 180
  181 TNRVAKSGDY FINRNSQMAS AIAEVGFLSN PEEERLLLDP DYREKVSFAI YLAVLKYFK

Type	Start	End	Confidence
Cytoplasmic	1	13	0.58
Transmembrane Helix	14	31	0.67
Non-Cytoplasmic	32	239	0.95