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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|77996838, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKYDVLVIG SGGAGMQAAL VAAKSGELNV ALMTKVFPTR SATCCAQGGT NAALRNVDKS  60
   61 DSIEKHAFDT IKGSDFLADQ DAVEFFVSLL PETILELDYF GVPFSRLEDG TIAQRPFGGQ 120
  121 SHPRTCYSAD KIGAVVLHTL YEQCLKNQVN ILTEWFLLDL VVENEQIIGV VAMNMKTGDI 180
  181 HPILAKAVVL ATGGAGRVYW NRTTNPFAST GDGMAAAFRV GVALKDPEFV QFHPTGLAGT 240
  241 GILMSEACRG EGGYLLNNKG ERFMQRYAPE KMELATRDLV SQAIETEIKE GRGFGEGINA 300
  301 YVLLDLRHLG REKILERLPQ IRELAIQFEG IDPIEQPIPV RPSCHYSMGG IDVIDYKTCA 360
  361 TVVKGLYAAG ECSCISIHGA NRLGGNSTAE AVAFGKVAGK AAAEYAQNVG FSSEKKVSEC 420
  421 AKKWENEYNI AVSRTNGPSV ASIRSRLAET MWLNVGVFRK EKEMLQAAKD VDALIEEYKY 480
  481 CVVGDKNRIY NTAFTQYIEL GNMLTVAKAI VIGALNRRES RGSHKREDYP QRDDKNYLKH 540
  541 TIITLEGSEY KLSYRPVVIT KYQPAERRY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle