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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78044672, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.32
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVGRLFVLM GVDMSNLIRS LKEAELRVKD FADETKKQFK DLGENIQKVG EKMSLAITAP  60
   61 LTFIGRQMVN TAMDAIESEN LFEVSFGNMA DAARKWSEET AKALGISAYS LRQNAGMFFT 120
  121 MFKSMGFSND AALRMSESLT QLSYDMASFY NLKPEEAFEK LRAGITGETE PLKALGILVD 180
  181 EETAKQYAYQ TGIAKTGEEL SQTQKVIARY GLILKQTAAA QGDLARTAES PANQARKLRE 240
  241 QWRDLSVTIG SILLPVITRM IDLLSKAIYI YQQLPRPLQV VTVAFTVLIA AVGPLLTVFG 300
  301 ALVTILPQLT AGFAALSTVL ARNPIVAIVM ALAAAFGMYW INAQLAKKAN EDMAKTNPNE 360
  361 IYKKYTDIFK EATKATANTT KEIKKFLAAF DEVYNVIEET EQANLGSAVE NLLPEWDITT 420
  421 PTTPTEGTGE NESPLKPPPI VPPARNQQPP WGATPQPAEE TAGTWERVRN RISEIWEELQ 480
  481 RRWEEVKSRL QWPIPAPALA PEWQTKLQNV WEGIKRGWET VKNGIVVGVP SLVTGIATNL 540
  541 ATLPGRLQTT WNTVKTSAST VWGNIKEKFR EIISGIPGLA QTYATQIGQK LEPVKTKAQQ 600
  601 VWNTTKEKFR EIISSIPSLA QTYATQIGQK FEPLKATVRS VWENIKTNFN TIIGSLPGLA 660
  661 QGIATKVGNF LSGIWEKVKG LKTELSALAG GGLAALLAAL GKRILPNIPI PAYASGGIVT 720
  721 TPQVALVGEK EPEAIIPLSK LDALLSSIQG EQTVINLNIG TLVADEAGLR ELERRLARVR 780
  781 IDEQRRVVMS GI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle