YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78044654, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRGLLLILS LLFLGLQGCA PKAIDFEQTS PKEKIVLTFS HVVSDASPKG RAARLWADLI  60
   61 YQRSGGRIEM KIYPNGTLYK DGEELEALKK GYVQIIAPAT SKLTGLDERW GVFDLPFFFN 120
  121 DLEQVHQLAD GPVGELLRKS MREKGIEVLA YWDNGFKILT ADRPLENLKD FQGLKIRIMD 180
  181 SPILKKQFLK LGAIPVPLSF NEVFAALENK KVNGSENTPS NLYSKKFYQL QSHVTVSNHG 240
  241 YLGYAVLMNR DYFNSLDKET RKILLDTLKE VTAWQRKIAL EQNAEDLARI RNDQNIKIHD 300
  301 LTPEEKEAWQ AVLKPIVYEI IPLFPKNLQN EILKTGNLN

Type	Start	End	Confidence
Signal Peptide	1	21	0.96
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	339	0.99