YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78044641, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRILLAFLL ALIAVASIVT VGWLSFPREA FADYRERGVP ILMYHKVNPD PKTGGLGLRV  60
   61 LPREFDWQMR FLKEHGFHTV SLDEAVDYLE FGKPLPEKPI VITFDDGYRD NYVYAFPILK 120
  121 KYGFRATIFI ITGIVGKTNE WDEREGKPTN YMLTWKQIDE MANYGIEFGA HTVNHPRLTK 180
  181 VPLELAEKEI FNSKKMLEAH FKRPVKYFCY PYGLYNDQIV EIVKKAGFRA ATTTQLGINA 240
  241 RGCDLYRLKR LRVTGHMSRR QFVEQLEKYL REDTWKREHK KFLPGYVKDT ILPLFPGRSG 300
  301 STTPGRSGGC MV

Type	Start	End	Confidence
Signal Peptide	1	22	0.94
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	312	0.98