YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MURC_CARHZ
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYYSTVLKR KVRKMLAVHF IAIGGIGMSG LARILQSKGY RVSGSDLKET ELTKKLRAEG  60
   61 ITVFIGHREE NLASDVSLVV VSTAVSQDNP ELLKAKRLGI PVMHRGELLA RLMQEKKGIA 120
  121 VAGTHGKTTT SSMIAYVLEK EGFDPVIAVG GEIVDLGYNA KAGQGEYMVA EADESDGSFL 180
  181 KLLPYAAVIT NIEADHLDYY QSFEEIKKAF KKFADNIRPE GFGVFCWDNL QVREMLKGYK 240
  241 KRKFTYGFSP GSDFMLRDYR EEQNQLVANI YYKNTLEGEL RLKVPGKHNI LNAAAATAVL 300
  301 RNIGLSFKAI SERLLEFNGA KRRFQILGER NGALIVDDYA HHPTEVEATL RAAKLYKDRD 360
  361 VLVVFQPHRY TRTHFFYKEF ARVLVDAEKV VLTGIYSAGE KPIPGVSGEM IAEEMKKLGK 420
  421 NPLYLESLDE VYNYLEQNLK PGLLVLLLGA GNINQVGYKL LGKA

Type	Start	End	Confidence
Cytoplasmic	1	15	0.87
Transmembrane Helix	16	35	0.88
Non-Cytoplasmic	36	464	0.99