YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78044531, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVFFFNYKN LWQYTLILIF AILIGLVFYH YLTEPVIKPQ IIDFYPVYKV ETSKKVVALT  60
   61 FDLSWGTKTY KPILNTLKKE NIKATFFLSG PWAKQHPEIV REIVKDGHEI GSHGHRHVNY 120
  121 TGLSPEEIKK EVVLAHEAIK EASNKTPTII RLPNGDYNKT VIKTLREIGY TAIQWSVDSL 180
  181 DWKNPGEEII LKRVLDSIHP GAIILMHASD TCKQTGQVLP EIIKELKKQG YTFITISRLL 240
  241 TLGPAAIQ

Type	Start	End	Confidence
Cytoplasmic	1	10	0.86
Transmembrane Helix	11	32	0.94
Non-Cytoplasmic	33	248	0.89