YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77996571, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYKANLLPPE LQKDVEINTK KLAILAGITA LVTIIIFSLI GFMVRVYYLK KDLEVKKANI  60
   61 VQLQKIAQKV NETKNEISLL NKEKEAFLEL KQKRLVFTVI LTDINLNIPK NTWLTEIKYN 120
  121 PATRELSLTG STRDSEEAGI FVYNLNNLPH FSKVLLVQMI RNNTGNYDFS IKAILK

Type	Start	End	Confidence
Non-Cytoplasmic	1	21	0.56
Transmembrane Helix	22	48	0.82
Cytoplasmic	49	176	0.55