YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77996551, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDIKKIMVVG AGQMGSGIAQ VAAQAGFETV LHDLNLDIVN KGLETIKKSL AKFVEKGKIT  60
   61 EAEKNEILGR IKPSDSLKNA ADCDLVIEAV VEKMEVKAKI FAELDQIAPP HAILATNTSS 120
  121 LPITEIAATT KRPERVIGMH FMNPVPLMKL VEIIRGLQTS DEVYQVIEEL SRKMDKVPVE 180
  181 CKDVPGFVSN RVLQVMINEA IWCLYEGVAS VEGIDTIMKL GMNHPMGPLA LADLIGLDTV 240
  241 LAILEVLYNG YGDPKYRPCP LLRQYVKAGW LGRKTGRGFY NYS

Type	Start	End	Confidence
Signal Peptide	1	23	0.62
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	283	0.98