YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77996492, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVFKNIFPVT EKGFTLIELI VVITIAGIIF LTAAISLDYT LAKITLANDA YALAQNLRQT  60
   61 KELASAQEKA FTLYFFQENN SYLISENYKA NKLYVLSPRL KFIAVPLDPV TIDYKGSSRA 120
  121 FSVEMANSYG VKVRVYTTPR TDRIWITPFY

Type	Start	End	Confidence
Cytoplasmic	1	13	0.55
Transmembrane Helix	14	36	0.89
Non-Cytoplasmic	37	150	0.58